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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10085304_10090823_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10085304 - 10090823

Intron Length:

5520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGGGC

5'SS Class:

major

3'SS Sequence:

GCTTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

TCCCTCTTGAAT

Flanking Amino Acid:

SKPLQIWDKKVRNGHIKRIT

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

59.7

39.4

Major BPS

74.6

0.61

65.6

41.4

Major PPT

83.8

0.76

0.8

80.8

31.2

Minor 5ss

23.1

-3.1

3.4

32.1

42.7

Minor BPS

56.6

0.29

1.5

69.01

42.1

Associated Gene:

Gene:

CFAP20

Ensembl Gene ID:

ENSAPLG00000001222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023245

10084803 - 10093161

8359

ENSAPLT00000022444

10084803 - 10095100

10298

ENSAPLT00000001280

10084803 - 10094309

9507