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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10094301_10095094_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10094301 - 10095094

Intron Length:

794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTAG

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCTGTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAGCAT

U12 Branch Point Sequence:

TCCTGCTAAGCA

Flanking Amino Acid:

LYLPVQNKAKQ*

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

37.5

Major BPS

55.5

0.14

1.4

40.9

Major PPT

0.52

41.2

Minor 5ss

37.7

-1.4

45.9

49.3

Minor BPS

45.5

-0.3

2.2

58.37

47.5

Associated Gene:

Gene:

CFAP20

Ensembl Gene ID:

ENSAPLG00000001222

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022444

10084803 - 10095100

10298