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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10142438_10142551_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10142438 - 10142551

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGGCAT

5'SS Class:

major

3'SS Sequence:

GTGTGGGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAG

U12 Branch Point Sequence:

TTCTGCAGAGGT

Flanking Amino Acid:

ENYLHSQRFKMDVVCLLPLD

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.8

0.4

1.3

62.2

43.8

Major BPS

45.4

-0.2

1.8

59.3

47.1

Major PPT

66.9

0.38

1.1

61.5

48.6

Minor 5ss

33.9

-1.8

3.3

47.2

48.2

Minor BPS

-0.7

2.3

61.52

47.8

Associated Gene:

Gene:

CNGB1

Ensembl Gene ID:

ENSAPLG00000002819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002863

10135862 - 10148920

13059