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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10147372_10148707_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10147372 - 10148707

Intron Length:

1336

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGGGGTGA

5'SS Class:

weak_major

3'SS Sequence:

TTGGATATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TTTGCCTTTATT

Flanking Amino Acid:

AGRSGIRLCFDPSFSPIPPK

Intron Amino Acid Position:

691

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.2

0.12

1.1

48.4

38.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

73.6

0.53

66.6

43.6

Minor 5ss

31.8

-2.1

3.5

42.2

46.3

Minor BPS

70.7

0.73

1.7

87.87

37.8

Associated Gene:

Gene:

CNGB1

Ensembl Gene ID:

ENSAPLG00000002819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002863

10135862 - 10148920

13059