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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10171724_10171806_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10171724 - 10171806

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGGGACTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTGAG

U12 Branch Point Sequence:

TGTTTTGGGACT

Flanking Amino Acid:

GQCRGCTHLQENAVLQERLS

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

74.9

35.3

Major BPS

47.4

-0.1

1.5

42.8

41.8

Major PPT

58.1

0.18

1.1

51.6

Minor 5ss

-2.3

2.7

36.3

40.6

Minor BPS

47.2

-0.1

2.1

71.61

39.7

Associated Gene:

Gene:

KIFC3

Ensembl Gene ID:

ENSAPLG00000003400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035552

10162182 - 10178335

16154

ENSAPLT00000034238

10162182 - 10178335

16154

ENSAPLT00000027764

10162182 - 10178335

16154

ENSAPLT00000003479

10154421 - 10177647

23227

ENSAPLT00000047805

10161332 - 10177647

16316