Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_10176678_10177258_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10176678 - 10177258

Intron Length:

581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCGTGAC

U12 Branch Point Sequence:

CTGGCGTGACCC

Flanking Amino Acid:

TSIRRKLQTSGKLRPVPV*

Intron Amino Acid Position:

928

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

46.4

-0.2

1.4

36.7

42.3

Major PPT

74.7

0.56

0.7

65.8

30.2

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

40.4

-0.7

2.3

50.23

46.5

Associated Gene:

Gene:

KIFC3

Ensembl Gene ID:

ENSAPLG00000003400

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035552

10162182 - 10178335

16154

ENSAPLT00000027764

10162182 - 10178335

16154