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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10187093_10187619_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
10187093 - 10187619

Intron Length:
527

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATACGGG

5'SS Class:
major

3'SS Sequence:
GTTTTGTGCACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TGATTTTTATTC

Flanking Amino Acid:
EYLLASGSSDRTVRFWDLEK

Intron Amino Acid Position:
211

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69
0.45
1.1
53
44.2

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
73.4
0.53
1
68.1
42.3

Minor 5ss
41.2
-1
3.3
55.4
48.8

Minor BPS
55.6
0.16
1.5
63.07
36.9

Associated Gene:

Gene:
KATNB1

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10180290 - 10195932
15643