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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10218004_10218370_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10218004 - 10218370

Intron Length:

367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGTTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCCCAC

U12 Branch Point Sequence:

TTTCTCTTGGCT

Flanking Amino Acid:

LPDSPEPCAKQCPRHWRSKR

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

83.9

30.3

Major BPS

41.9

-0.5

1.3

43.8

40.8

Major PPT

72.6

0.51

1.1

68.6

42.1

Minor 5ss

44.3

-0.6

3.1

64.1

47.4

Minor BPS

-0

3.5

84.21

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004415

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004526

10212679 - 10219313

6635