Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_10222732_10222976_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10222732 - 10222976

Intron Length:

245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGTGT

5'SS Class:

strong_major

3'SS Sequence:

TGCTCCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAG

U12 Branch Point Sequence:

CTTTTCTGCTCC

Flanking Amino Acid:

IFTIAFYIFLRCNYQQFRSE

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

70.4

42.5

Major BPS

48.4

-0.1

1.5

56.9

40.5

Major PPT

69.1

0.43

61.8

39.9

Minor 5ss

37.1

-1.5

3.6

55.4

48.8

Minor BPS

38.7

-0.8

3.5

62.26

43.5

Associated Gene:

Gene:

ADGRG3

Ensembl Gene ID:

ENSAPLG00000004491

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004618

10220865 - 10226180

5316