Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_10223090_10223577_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10223090 - 10223577

Intron Length:

488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGACAACC

5'SS Class:

major

3'SS Sequence:

ACATGTTTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAC

U12 Branch Point Sequence:

CCCATCTGACCC

Flanking Amino Acid:

NHLTFFTLLLNPALNRFTAQ

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.38

1.1

61.3

37.5

Major BPS

72.6

0.56

0.9

63.1

35.8

Major PPT

66.1

0.36

1.1

61.6

43.8

Minor 5ss

-1.7

2.9

41.7

38.8

Minor BPS

44.1

-0.4

1.7

46.66

42.8

Associated Gene:

Gene:

ADGRG3

Ensembl Gene ID:

ENSAPLG00000004491

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004618

10220865 - 10226180

5316