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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10234143_10234649_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
10234143 - 10234649

Intron Length:
507

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAGGCTGG

5'SS Class:
major

3'SS Sequence:
TTGTGCAATGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTGCAA

U12 Branch Point Sequence:
TCTGGCTAAGCC

Flanking Amino Acid:
LLLFLLSPLQGVGASTRQED

Intron Amino Acid Position:
301

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.4
0.65
1.1
60.6
46.7

Major BPS
50.7
0.02
1.5
63.4
44.3

Major PPT
70
0.45
1
63.6
41.9

Minor 5ss
41.9
-0.9
3.2
55.4
48.8

Minor BPS
43.7
-0.4
2.3
57.36
47.5

Associated Gene:

Gene:
ADGRG1

Ensembl Gene ID:

Chromosome:
12

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10226769 - 10235550
8782