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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10272508_10273220_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10272508 - 10273220

Intron Length:

713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

CTTGTAATCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CTCTCCTGACTT

Flanking Amino Acid:

APYDPNGKPERFYYNVESCG

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

73.9

0.54

0.9

70.5

38.9

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

55.6

0.25

1.8

72.16

45.3

Associated Gene:

Gene:

POLR2C

Ensembl Gene ID:

ENSAPLG00000005385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005624

10271986 - 10279308

7323