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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10274857_10275961_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10274857 - 10275961

Intron Length:

1105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTCAGTGTC

5'SS Class:

major

3'SS Sequence:

TCTCCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TTGCAGTTAATT

Flanking Amino Acid:

LISNNPRVIPVTSRSRDNDP

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.3

71.6

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

85.4

0.8

0.7

80.4

24.8

Minor 5ss

33.1

-1.9

3.2

45.3

42.7

Minor BPS

50.5

0.09

2.2

74.29

42.7

Associated Gene:

Gene:

POLR2C

Ensembl Gene ID:

ENSAPLG00000005385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005624

10271986 - 10279308

7323