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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10279309_10281309_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10279309 - 10281309

Intron Length:

2001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

CATGCCCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAA

U12 Branch Point Sequence:

TCTCTCTCAATC

Flanking Amino Acid:

LHYAGDQSTDFNWYTRRAVL

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

1.3

75.3

40.8

Major BPS

73.4

0.58

0.9

75.3

29.7

Major PPT

70.8

0.47

0.9

62.6

34.2

Minor 5ss

38.2

-1.3

51.1

38.4

Minor BPS

59.7

0.28

1.5

67.51

38.4

Associated Gene:

Gene:

COQ9

Ensembl Gene ID:

ENSAPLG00000005848

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006083

10277384 - 10284814

7431