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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10284896_10286546_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10284896 - 10286546

Intron Length:

1651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTGTAC

U12 Branch Point Sequence:

CTGCCCTGTACT

Flanking Amino Acid:

SERAEQSHTQAVAVAAAAEM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

39.5

Major BPS

44.7

-0.3

1.3

40.7

39.7

Major PPT

71.4

0.48

1.1

65.1

45.5

Minor 5ss

35.7

-1.6

3.3

45.9

49.3

Minor BPS

51.9

0.14

1.9

70.49

45.9

Associated Gene:

Gene:

CIAPIN1

Ensembl Gene ID:

ENSAPLG00000006126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006361

10284836 - 10291730

6895