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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10289123_10289452_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

10289123 - 10289452

Intron Length:

330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATCCATT

5'SS Class:

weak_minor

3'SS Sequence:

TGGTATGCTCCAG|G

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

GTGTTAT

U12 Branch Point Sequence:

TGTGTGTTATCT

Flanking Amino Acid:

SANDMNDEEMDLLDSDELLD

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.2

67.1

43.8

Major BPS

63.6

0.34

1.4

57.4

49.1

Major PPT

68.6

0.42

1.1

58.5

Minor 5ss

74.8

0.83

1.9

80.5

34.7

Minor BPS

47.6

-0.1

2.3

71.72

45.4

Associated Gene:

Gene:

CIAPIN1

Ensembl Gene ID:

ENSAPLG00000006126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029561

10285743 - 10291730

5988

ENSAPLT00000006361

10284836 - 10291730

6895