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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10290170_10290780_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10290170 - 10290780

Intron Length:

611

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAATAGT

5'SS Class:

major

3'SS Sequence:

GGTCTCTTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

ATTACAGAAAGT

Flanking Amino Acid:

SSQPKSACGNCYLGDAFRCA

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

77.1

37.7

Major BPS

0.85

0.9

39.9

Major PPT

69.8

0.45

1.1

65.3

41.1

Minor 5ss

39.2

-1.2

55.4

42.2

Minor BPS

39.7

-0.7

2.5

64.06

45.9

Associated Gene:

Gene:

CIAPIN1

Ensembl Gene ID:

ENSAPLG00000006126

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029561

10285743 - 10291730

5988

ENSAPLT00000006361

10284836 - 10291730

6895