Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_10327092_10328475_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10327092 - 10328475

Intron Length:

1384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTCCTACCA

Flanking Amino Acid:

FYNGLWAYDGWNQLNYITEE

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

77.4

33.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.6

0.78

0.8

78.9

34.4

Minor 5ss

38.5

-1.3

3.4

52.2

Minor BPS

61.2

0.35

1.9

79.54

36.7

Associated Gene:

Gene:

SLC7A9

Ensembl Gene ID:

ENSAPLG00000006352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006615

10321405 - 10332818

11414