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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10364713_10365792_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10364713 - 10365792

Intron Length:

1080

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATTT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTTATACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

CTGTCTTTTATA

Flanking Amino Acid:

IYAVPCKNKKEETPLPPSNN

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.6

33.2

Major BPS

84.6

0.86

41.2

Major PPT

81.1

0.7

0.9

76.3

36.9

Minor 5ss

42.5

-0.8

3.4

64.3

47.2

Minor BPS

59.1

0.28

1.6

66.16

Associated Gene:

Gene:

CEP89

Ensembl Gene ID:

ENSAPLG00000006679

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006968

10345725 - 10369151

23427