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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10366746_10367960_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10366746 - 10367960

Intron Length:

1215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GCTTTTTTATTT

Flanking Amino Acid:

RSPNPSPERPRSALAAAILA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

95.5

1.02

0.5

88.9

28.1

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

58.3

0.34

1.6

71.36

40.7

Associated Gene:

Gene:

CEP89

Ensembl Gene ID:

ENSAPLG00000006679

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006968

10345725 - 10369151

23427