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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10377259_10378126_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10377259 - 10378126

Intron Length:

868

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTAGA

5'SS Class:

major

3'SS Sequence:

AATCTTTTGACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

AATCTTTTGACA

Flanking Amino Acid:

YCLDPACSAASMGLKEGDYI

Intron Amino Acid Position:

549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

72.1

39.4

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

73.1

0.52

68.9

41.1

Minor 5ss

37.3

-1.4

2.7

41.7

Minor BPS

61.6

0.36

1.2

66.32

33.2

Associated Gene:

Gene:

RHPN2

Ensembl Gene ID:

ENSAPLG00000007093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018285

10375492 - 10401211

25720

ENSAPLT00000007412

10375492 - 10401861

26370