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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10378274_10378978_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10378274 - 10378978

Intron Length:

705

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

ATGTTACTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

TAAACCATAATG

Flanking Amino Acid:

VKVKDFFHRLGPLSVFSAKQ

Intron Amino Acid Position:

500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

75.8

33.3

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

76.9

0.6

0.9

67.2

43.4

Minor 5ss

42.3

-0.9

2.5

50.7

40.4

Minor BPS

54.6

0.01

1.7

59.78

41.5

Associated Gene:

Gene:

RHPN2

Ensembl Gene ID:

ENSAPLG00000007093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018285

10375492 - 10401211

25720

ENSAPLT00000007412

10375492 - 10401861

26370