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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10380180_10380326_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10380180 - 10380326

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAACTGAC

5'SS Class:

strong_major

3'SS Sequence:

AATTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

ACAGTTTCAATT

Flanking Amino Acid:

LKDKVQRKQLGKAHLRKAVV

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

1.1

75.8

34.3

Major BPS

76.9

0.67

1.2

31.9

Major PPT

87.6

0.84

0.8

85.4

34.2

Minor 5ss

38.5

-1.3

3.2

45.2

Minor BPS

47.6

-0.1

1.5

58.23

39.7

Associated Gene:

Gene:

RHPN2

Ensembl Gene ID:

ENSAPLG00000007093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018285

10375492 - 10401211

25720

ENSAPLT00000007412

10375492 - 10401861

26370