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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10384398_10385384_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10384398 - 10385384

Intron Length:

987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

CACGTCTTAACA

Flanking Amino Acid:

PTRHMGILFTWYDSFTGVPV

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

73.3

0.52

74.8

33.9

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

62.1

0.38

1.5

63.38

43.3

Associated Gene:

Gene:

RHPN2

Ensembl Gene ID:

ENSAPLG00000007093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018285

10375492 - 10401211

25720

ENSAPLT00000007412

10375492 - 10401861

26370