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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10386265_10387963_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10386265 - 10387963

Intron Length:

1699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTATTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

CTTAGCTGAATT

Flanking Amino Acid:

KEVDFTLPLKDFILEHYSED

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

84.7

26.5

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

89.7

0.89

0.7

89.1

27.3

Minor 5ss

44.1

-0.6

2.9

61.1

43.8

Minor BPS

52.6

0.16

73.39

43.7

Associated Gene:

Gene:

RHPN2

Ensembl Gene ID:

ENSAPLG00000007093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018285

10375492 - 10401211

25720

ENSAPLT00000007412

10375492 - 10401861

26370