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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10388040_10390770_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10388040 - 10390770

Intron Length:

2731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTTTA

5'SS Class:

major

3'SS Sequence:

ATCTTTTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATCTTTTAATC

Flanking Amino Acid:

NISVEVYQNTEETFSIPLVP

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

77.8

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.3

0.7

0.8

76.3

31.7

Minor 5ss

-0.5

2.8

54.7

43.6

Minor BPS

64.6

0.44

1.1

66.86

32.1

Associated Gene:

Gene:

RHPN2

Ensembl Gene ID:

ENSAPLG00000007093

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007412

10375492 - 10401861

26370

ENSAPLT00000018285

10375492 - 10401211

25720