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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10412835_10413734_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10412835 - 10413734

Intron Length:

900

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

AAATATGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTATTTAAAA

Flanking Amino Acid:

RGRKLGITGQAFGVGALEEE

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

75.3

35.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

66.6

0.37

1.1

46.2

Minor 5ss

41.4

-1

3.1

56.7

41.9

Minor BPS

70.8

0.65

1.5

81.76

32.7

Associated Gene:

Gene:

GPATCH1

Ensembl Gene ID:

ENSAPLG00000007584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007906

10408603 - 10425467

16865