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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10423416_10423797_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10423416 - 10423797

Intron Length:

382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTGAT

5'SS Class:

major

3'SS Sequence:

TTCCTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATGAAA

U12 Branch Point Sequence:

TTCCTTTTTACA

Flanking Amino Acid:

KRERKHKKEKKKKHRKHKTK

Intron Amino Acid Position:

897

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

33.1

Major BPS

49.5

-0

1.3

59.7

34.6

Major PPT

91.2

0.93

0.6

86.8

24.1

Minor 5ss

40.5

-1.1

3.2

57.9

46.8

Minor BPS

56.6

0.2

1.6

67.83

38.5

Associated Gene:

Gene:

GPATCH1

Ensembl Gene ID:

ENSAPLG00000007584

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007906

10408603 - 10425467

16865