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Intron Name: Anas_platyrhynchos_platyrhynchos_12_1049202_1070483_R

Intron Information:

Intron Rank:

129789

Intron Class:

major

Intron Phase:

Intron Coordinates:

1049202 - 1070483

Intron Length:

21282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTGGTGCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACAAAT

U12 Branch Point Sequence:

AAACAAACAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

60.7

0.27

65.3

28.1

Major PPT

75.6

0.58

65.9

45.3

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

35.2

-1

1.9

48.21

36.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017020

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017687

1046035 - 1070525

24491