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Intron Name: Anas_platyrhynchos_platyrhynchos_12_10772120_10788061_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10772120 - 10788061

Intron Length:

15942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTCTCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTTAA

U12 Branch Point Sequence:

CAATAGTTAACT

Flanking Amino Acid:

SRAVMKAVKPGVAWPDMHRL

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

30.5

Major BPS

64.3

0.36

1.2

55.7

41.6

Major PPT

67.7

0.4

71.4

33.4

Minor 5ss

31.4

-2.1

3.5

46.6

48.7

Minor BPS

0.11

2.2

71.13

45.1

Associated Gene:

Gene:

PEPD

Ensembl Gene ID:

ENSAPLG00000008402

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008841

10753894 - 10886329

132436