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Intron Name: Anas_platyrhynchos_platyrhynchos_12_1133275_1249718_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1133275 - 1249718

Intron Length:

116444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

GAAAAACTAACC

Flanking Amino Acid:

SGCIKRPDLCGHRPFQCRYC

Intron Amino Acid Position:

1347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

0.45

0.9

67.6

25.3

Major PPT

83.2

0.75

0.8

79.8

32.1

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

41.9

-0.6

50.14

38.5

Associated Gene:

Gene:

ZNF536

Ensembl Gene ID:

ENSAPLG00000013219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027294

1133042 - 1373085

240044

ENSAPLT00000026124

1132694 - 1326172

193479

ENSAPLT00000020457

1133042 - 1340131

207090

ENSAPLT00000040743

1133042 - 1334633

201592

ENSAPLT00000029524

1133042 - 1334633

201592