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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11340640_11348124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11340640 - 11348124

Intron Length:

7485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGGAGC

5'SS Class:

major

3'SS Sequence:

TCCACTTGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

CCCCTTTCCACT

Flanking Amino Acid:

TENSTVALAKVRSFGTEDRP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

63.9

42.4

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

73.3

0.52

68.2

37.3

Minor 5ss

26.7

-2.7

2.9

25.7

36.9

Minor BPS

42.1

-0.5

1.8

51.97

43.5

Associated Gene:

Gene:

LSM14A

Ensembl Gene ID:

ENSAPLG00000009420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009867

11340519 - 11359516

18998