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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11351076_11352877_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11351076 - 11352877

Intron Length:

1802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

ARSLKTQMSQGRSSPQMDHL

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

80.3

34.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.1

0.9

0.7

90.1

24.5

Minor 5ss

35.2

-1.7

3.1

49.5

46.7

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

LSM14A

Ensembl Gene ID:

ENSAPLG00000009420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009867

11340519 - 11359516

18998