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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11355968_11356865_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11355968 - 11356865

Intron Length:

898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGGCCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

AACAAATCAATC

Flanking Amino Acid:

FFDNISCDDNRERRPTWAEE

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.7

41.8

Major BPS

62.4

0.31

32.1

Major PPT

66.2

0.36

1.1

61.7

44.4

Minor 5ss

39.5

-1.2

3.3

47.3

Minor BPS

41.3

-0.6

1.8

45.7

35.9

Associated Gene:

Gene:

LSM14A

Ensembl Gene ID:

ENSAPLG00000009420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009867

11340519 - 11359516

18998