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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11601282_11601380_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11601282 - 11601380

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGAATA

5'SS Class:

major

3'SS Sequence:

GCTTATTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TCTTGCTTATTT

Flanking Amino Acid:

MNMKSRFDIKSMAGNIIPAI

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

73.7

36.8

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

82.6

0.73

0.9

76.5

37.2

Minor 5ss

-1.2

3.1

50.4

45.6

Minor BPS

59.4

0.37

79.24

43.6

Associated Gene:

Gene:

UBA2

Ensembl Gene ID:

ENSAPLG00000011122

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011636

11597625 - 11609759

12135