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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11602548_11603096_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11602548 - 11603096

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTGTT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTCTTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

TATTCCTTATCT

Flanking Amino Acid:

PLDWAEVQNQEKNVSDQQNE

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

87.2

27.3

Major BPS

78.8

0.72

67.9

40.1

Major PPT

77.3

0.61

78.7

27.4

Minor 5ss

38.7

-1.3

3.4

58.4

46.2

Minor BPS

80.5

1.04

1.5

93.52

34.3

Associated Gene:

Gene:

UBA2

Ensembl Gene ID:

ENSAPLG00000011122

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011636

11597625 - 11609759

12135