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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11606649_11607238_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11606649 - 11607238

Intron Length:

590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

AATTATAATATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTGTTCTTAATT

Flanking Amino Acid:

HCIVWAKYLFNQLFGEEDAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

33.2

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

63.3

0.3

56.4

42.6

Minor 5ss

43.6

-0.7

2.9

58.5

40.3

Minor BPS

83.4

1.13

91.18

32.6

Associated Gene:

Gene:

UBA2

Ensembl Gene ID:

ENSAPLG00000011122

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011636

11597625 - 11609759

12135