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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11625861_11626823_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11625861 - 11626823

Intron Length:

963

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTATTAATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTAATT

Flanking Amino Acid:

FTDEPEEQAQRIAAAAGCEK

Intron Amino Acid Position:

271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.3

32.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.8

0.69

0.9

75.1

38.4

Minor 5ss

33.5

-1.9

3.1

44.4

43.7

Minor BPS

76.9

0.92

1.4

92.73

28.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018944

11622133 - 11631043

8911

ENSAPLT00000012466

11622133 - 11631043

8911