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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11629099_11629938_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11629099 - 11629938

Intron Length:

840

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGACAA

5'SS Class:

major

3'SS Sequence:

TTCTTTTATTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTTCTTTTATT

Flanking Amino Acid:

GVRDAASYPPMCLQDKVLGQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

69.9

36.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

88.7

0.87

0.7

88.7

27.2

Minor 5ss

33.7

-1.9

3.2

43.9

43.6

Minor BPS

75.6

0.89

1.5

91.64

31.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018944

11622133 - 11631043

8911

ENSAPLT00000012466

11622133 - 11631043

8911