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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11639098_11640970_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11639098 - 11640970

Intron Length:

1873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAATTTAA

5'SS Class:

major

3'SS Sequence:

ATAGTCAACATAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAGTCAA

U12 Branch Point Sequence:

TGGATCAGAATA

Flanking Amino Acid:

NNEFGWNIRSLSRTQLAFVI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.2

66.4

35.2

Major BPS

67.8

0.44

1.1

69.6

37.5

Major PPT

55.1

0.12

48.4

38.8

Minor 5ss

42.5

-0.8

2.8

59.1

45.4

Minor BPS

45.7

-0.3

1.7

54.53

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036514

11635618 - 11641625

6008