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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11666035_11666079_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11666035 - 11666079

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCCCGCATC

5'SS Class:

major

3'SS Sequence:

GGAGGCGGAGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCGCAT

U12 Branch Point Sequence:

GCGTCGAGGACT

Flanking Amino Acid:

GEHGVGKTSLAGEGNTYDRS

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.2

66.3

41.6

Major BPS

-0.1

1.4

56.9

40.5

Major PPT

37.6

-0.7

1.6

24.5

36.8

Minor 5ss

28.1

-2.5

40.2

Minor BPS

-0.6

2.3

57.45

45.2

Associated Gene:

Gene:

RRAD

Ensembl Gene ID:

ENSAPLG00000012711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013223

11660727 - 11668601

7875