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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11666090_11666194_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11666090 - 11666194

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCGCGGGGC

5'SS Class:

major

3'SS Sequence:

TTTCCCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCCAA

U12 Branch Point Sequence:

GTTTCCCCAACG

Flanking Amino Acid:

GVGKTSLAGEGNTYDRSIVV

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.2

60.2

38.5

Major BPS

50.5

0.01

1.3

60.6

37.4

Major PPT

85.6

0.8

0.7

77.5

31.2

Minor 5ss

12.3

-4.4

3.7

13.9

29.1

Minor BPS

58.1

0.12

69.84

42.7

Associated Gene:

Gene:

RRAD

Ensembl Gene ID:

ENSAPLG00000012711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013223

11660727 - 11668601

7875