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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11666990_11668323_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11666990 - 11668323

Intron Length:

1334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCATCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTCTTTCCATC

Flanking Amino Acid:

LVRSREVSVDEGRACAVVFD

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.2

28.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

81.7

0.71

0.8

74.2

35.6

Minor 5ss

40.6

-1

2.8

49.4

41.4

Minor BPS

-0.2

1.9

63.08

37.1

Associated Gene:

Gene:

RRAD

Ensembl Gene ID:

ENSAPLG00000012711

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013223

11660727 - 11668601

7875