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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11771978_11772263_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11771978 - 11772263

Intron Length:

286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACTTC

5'SS Class:

strong_major

3'SS Sequence:

CATGAATTTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TAAGCTTTAAAT

Flanking Amino Acid:

KEPISISEKQLEKFRTLLFT

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.6

35.3

Major BPS

87.3

0.93

0.8

36.5

Major PPT

70.5

0.46

61.6

43.1

Minor 5ss

47.8

-0.2

2.9

67.4

Minor BPS

63.8

0.51

1.5

75.33

Associated Gene:

Gene:

CA7

Ensembl Gene ID:

ENSAPLG00000012712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013252

11771855 - 11779963

8109