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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11772447_11774242_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11772447 - 11774242

Intron Length:

1796

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATA|GCATGTTTA

5'SS Class:

major

3'SS Sequence:

TAAAAGTAAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTGCACTTAAAA

Flanking Amino Acid:

VFLEVRITKIKYQIPIVFQG

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.3

0.29

1.3

63.1

37.7

Major BPS

81.9

0.79

0.9

80.1

Major PPT

-0.2

1.2

38.8

42.2

Minor 5ss

41.4

-1

3.9

58.8

41.4

Minor BPS

61.7

0.36

1.6

71.63

39.7

Associated Gene:

Gene:

CA7

Ensembl Gene ID:

ENSAPLG00000012712

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013252

11771855 - 11779963

8109