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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11787050_11788195_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11787050 - 11788195

Intron Length:

1146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TTTTCCTTACAG

Flanking Amino Acid:

NLVVATQLPESTLLRLAELL

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

81.1

32.6

Major BPS

71.4

0.53

67.3

39.3

Major PPT

93.4

0.98

0.6

88.4

21.4

Minor 5ss

33.3

-1.9

3.3

47.8

47.9

Minor BPS

68.9

0.46

1.8

76.73

40.6

Associated Gene:

Gene:

NAE1

Ensembl Gene ID:

ENSAPLG00000013192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013807

11783583 - 11797448

13866