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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11789669_11790691_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11789669 - 11790691

Intron Length:

1023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATACCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCAATAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATTAT

U12 Branch Point Sequence:

TTTTCCTTCAAT

Flanking Amino Acid:

KEAFRQLIRQGILKNENGIP

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

Major BPS

59.2

0.23

1.3

43.5

Major PPT

62.8

0.29

1.1

69.4

34.9

Minor 5ss

34.7

-1.7

3.2

49.7

46.1

Minor BPS

74.1

0.84

1.8

93.4

34.6

Associated Gene:

Gene:

NAE1

Ensembl Gene ID:

ENSAPLG00000013192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013807

11783583 - 11797448

13866