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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11790784_11792060_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11790784 - 11792060

Intron Length:

1277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

TTTTTTTTTATA

Flanking Amino Acid:

NVNSALNTTKVPRCIEEIFN

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.3

28.1

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

94.7

1.01

0.5

91.9

19.2

Minor 5ss

36.6

-1.5

3.1

46.9

48.4

Minor BPS

66.5

0.51

1.5

77.98

32.4

Associated Gene:

Gene:

NAE1

Ensembl Gene ID:

ENSAPLG00000013192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013807

11783583 - 11797448

13866