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Intron Name: Anas_platyrhynchos_platyrhynchos_12_11793406_11793774_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11793406 - 11793774

Intron Length:

369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TGTACTGGAACC

Flanking Amino Acid:

AAKLLQSLGKAPESISEREL

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.6

29.6

Major BPS

79.7

0.74

79.6

35.6

Major PPT

0.76

0.8

77.4

36.9

Minor 5ss

36.1

-1.6

2.6

Minor BPS

-0.1

2.1

64.81

40.5

Associated Gene:

Gene:

NAE1

Ensembl Gene ID:

ENSAPLG00000013192

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013807

11783583 - 11797448

13866