Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_12_11836362_11837418_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11836362 - 11837418

Intron Length:

1057

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGAATA

5'SS Class:

major

3'SS Sequence:

GTTTTTTGTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TATTCTGTCATG

Flanking Amino Acid:

SVKKPDPNIKNNAASEGVLA

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

76.2

32.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

81.2

0.7

0.9

81.2

36.5

Minor 5ss

44.9

-0.6

2.8

57.9

40.8

Minor BPS

46.4

-0.4

2.4

59.68

Associated Gene:

Gene:

DYNC1LI2

Ensembl Gene ID:

ENSAPLG00000013844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014478

11819051 - 11886379

67329